Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs10754275 | chr1:89895193 | A/G | 2.36E-7 | 214 | 8.55 | 13.97 | 16.53 | KM Plot |
KIRP | rs10766939 | chr11:22331206 | G/T | 3.22E-6 | 213 | 2.52 | 20.05 | 14.87 | KM Plot |
KIRP | rs10801709 | chr1:89541519 | G/A | 2.66E-5 | 213 | 16.53 | 17.52 | 10.53 | KM Plot |
KIRP | rs10802799 | chr1:235706243 | A/C | 6.3E-5 | 207 | 13.1 | 16.93 | 16.18 | KM Plot |
KIRP | rs10802800 | chr1:235706283 | A/G | 5.87E-5 | 207 | 13.17 | 16.97 | 16.18 | KM Plot |
KIRP | rs10802803 | chr1:235709610 | A/G | 4.2E-5 | 211 | 13.38 | 17.6 | 14.87 | KM Plot |
KIRP | rs10824037 | chr10:75588878 | G/A | 0 | 206 | 14.93 | 20.12 | 4.82 | KM Plot |
KIRP | rs10824039 | chr10:75602849 | G/A | 2.22E-6 | 214 | 15.1 | 18.03 | 5.57 | KM Plot |
KIRP | rs10849819 | chr12:121373689 | C/T | 0.00036 | 202 | 13.03 | 19.53 | 13.63 | KM Plot |
KIRP | rs10865505 | chr2:28844223 | A/G | 0.000162 | 208 | 16.68 | 12.38 | 20.4 | KM Plot |
KIRP | rs10865506 | chr2:28844252 | C/G | 0.000117 | 207 | 16.93 | 12.13 | 20.27 | KM Plot |
KIRP | rs10873651 | chr15:24517836 | A/G | 0.000137 | 207 | 18 | 14.03 | 10.63 | KM Plot |
KIRP | rs10887942 | chr10:91070051 | G/A | 5.33E-8 | 206 | 16.48 | 17.7 | 6.92 | KM Plot |
KIRP | rs10887944 | chr10:91081654 | G/T | 5.33E-8 | 207 | 16.48 | 16.93 | 6.92 | KM Plot |
KIRP | rs10887945 | chr10:91087256 | C/T | 2.97E-7 | 208 | 16.43 | 17.7 | 9.77 | KM Plot |